We found the check batch total will not update if we're trying to build a check batch rather than an EFT batch and EFT is enabled on the vendor - which we now want a paper check for. Once we disable (remove) the EFT settings for the vendor and run through the Select Checks >> Build a Batch steps (payment method = Check), the batch total updates correctly. We update the EFT details for vendors but always print paper checks. We found this issue recently after upgrading to GP 2013. In GP 10 it was updating correctly.
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