Think I follow. I’ll take a stab at answering with this idea. Allow post to the sub ledger and not the G/L. This means you can account for the remaining invoice value due and deposit payment normally when able to.
Alter the customer posting group - “Receivables Account” to use a nominal for irregular/correction postings. Post an invoice to the customer and balance to the same account. You will then net off the posting on the g/l but have the required data on the customer ledger entry. There will be no need to redo a year end routine as the net affect is 0. Would mean opening up a closed period if you want the original posting date of the invoice
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